BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014D01LP1|AL426669
(769 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1595 1447 0.0
>3x_Contig1595
Length = 10795
Score = 1447 bits (730), Expect = 0.0
Identities = 766/773 (99%), Gaps = 5/773 (0%)
Strand = Plus / Minus
Query: 1 atcatcttatctatctagcagaaatatatcaactctttcactagtggaagctgcatcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3769 atcatcttatctatctagcagaaatatatcaactctttcactagtggaagctgcatcctt 3710
Query: 61 taaagtatagatagacatgctcgaacatttattacaaataaccaaattgaaatagacctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3709 taaagtatagatagacatgctcgaacatttattacaaataaccaaattgaaatagacctg 3650
Query: 121 tgcaattggtaagaatgaatgaaccccgattgtttaaacggcatagttcaacacagtcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3649 tgcaattggtaagaatgaatgaaccccgattgtttaaacggcatagttcaacacagtcat 3590
Query: 181 cgttgagccgtgttgtcaagctatagatcaattcttagtcctacccagtcgggacatctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3589 cgttgagccgtgttgtcaagctatagatcaattcttagtcctacccagtcgggacatctg 3530
Query: 241 cttcagatgcggttttcacctgaccgtcacagagtgaggttttccggttatttgggtgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3529 cttcagatgcggttttcacctgaccgtcacagagtgaggttttccggttatttgggtgct 3470
Query: 301 gtgccaaaccgcagtgcagtgcagtgcagcgtgaacatacatcgaaaggacaactcctgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3469 gtgccaaaccgcagtgcagtgcagtgcagcgtgaacatacatcgaaaggacaactcctgc 3410
Query: 361 tattgggtgtccagttgtaccacgtacttcgtacgt-gta-aatgtctatgtaagagcct 418
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 3409 tattgggtgtccagttgtaccacgtacttcgtacgtggtacaatgtctatgtaagagcct 3350
Query: 419 gtatatagcgacgatagttcacatggattggtaagtgtgtgtatggtgttgaattaaatc 478
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3349 gtatatagcgacgatagtacacatggattggtaagtgtgtgtatggtgttgaattaaatc 3290
Query: 479 acgtcacgtgacgtga--ggatgctaatccgaattggtgggtccgcaatcttaagtcctt 536
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 3289 acgtcacgtgacgtgacgtgat-ctaatccgaattggtgggtccgcaatcttaagtcctt 3231
Query: 537 tttcctacagccctttccccttctgcgatggaacatctgccaggttgttccatgagattc 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3230 tttcctacagccctttccccttctgcgatggaacatctgccaggttgttccatgagattc 3171
Query: 597 ccccggtcattcactgcgggatttgttcatcgtggctctcgatttgctgatttttccggg 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3170 ccccggtcattcactgcgggatttgttcatcgtggctctcgatttgctgatttttccggg 3111
Query: 657 tgtgacaagtccggaaaaacctttgggtgtttgctctacgtggaagaagacacgtcgggc 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3110 tgtgacaagtccggaaaaacctttgggtgtttgctctacgtggaagaagacacgtcgggc 3051
Query: 717 atgatttggagcaacggtgtgccactcctacgtttctctcgagggtcagctgt 769
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3050 atgatttggagcaacggtgtgccactcctacgtttctctcgagggtcagctgt 2998
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3876
Number of Sequences: 1807
Number of extensions: 3876
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 769
length of database: 10,358,551
effective HSP length: 16
effective length of query: 753
effective length of database: 10,329,639
effective search space: 7778218167
effective search space used: 7778218167
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)